Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Krt88Q9CPR6 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Mir6420-201ENSMUST00000185032 102 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm38158-201ENSMUST00000194617 339 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm45331-201ENSMUST00000209868 554 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm8712-201ENSMUST00000221090 701 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.23□□□□□ -0.77
Krt88Q9CPR6 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm26286-201ENSMUST00000104166 134 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm15547-201ENSMUST00000122152 333 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm44008-201ENSMUST00000204345 412 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms