Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Trim11Q99PQ2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Gm22846-201ENSMUST00000157706 270 ntBASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Gm27341-201ENSMUST00000183570 106 ntBASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Gm6905-201ENSMUST00000205729 511 ntBASIC12.94□□□□□ -0.34
Trim11Q99PQ2 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim11Q99PQ2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm13809-201ENSMUST00000117921 597 ntBASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm15617-201ENSMUST00000118973 771 ntBASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm11941-201ENSMUST00000119904 610 ntBASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm15595-201ENSMUST00000120840 961 ntBASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Olfml3-204ENSMUST00000169286 874 ntBASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm42660-201ENSMUST00000197733 947 ntBASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm5996-201ENSMUST00000211110 718 ntBASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.93□□□□□ -0.34
Trim11Q99PQ2 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.93□□□□□ -0.34
Trim11Q99PQ2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim11Q99PQ2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim11Q99PQ2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms