Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm4917-201ENSMUST00000121452 650 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm12254-201ENSMUST00000134617 471 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm23479-201ENSMUST00000158876 122 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm17107-201ENSMUST00000170983 553 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm21963-201ENSMUST00000179519 330 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm9771-201ENSMUST00000198267 1137 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gm42859-201ENSMUST00000199572 193 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh23Q99PF4 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm29783-201ENSMUST00000219398 369 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 CR974487.1-201ENSMUST00000220984 413 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm10537-201ENSMUST00000192625 1698 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm11380-201ENSMUST00000118067 560 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm14650-201ENSMUST00000120400 889 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm5766-202ENSMUST00000161633 799 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm5873-201ENSMUST00000177157 1066 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 AC174647.1-201ENSMUST00000227419 1271 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm15664-201ENSMUST00000160167 184 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm5205-201ENSMUST00000182253 1003 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm37486-201ENSMUST00000195663 405 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Gm18065-201ENSMUST00000221395 526 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh23Q99PF4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Snord17-201ENSMUST00000104526 238 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Gm12047-201ENSMUST00000117561 944 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Gm20474-201ENSMUST00000180089 596 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Mir8111-201ENSMUST00000184463 137 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdh23Q99PF4 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.18□□□□□ -0.62
Cdh23Q99PF4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms