Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Gm23200-201ENSMUST00000104379 132 ntBASIC15.37■□□□□ 0.05
Rtn4Q99P72 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Gm22902-201ENSMUST00000158488 302 ntBASIC15.37■□□□□ 0.05
Rtn4Q99P72 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Gm37012-201ENSMUST00000194991 1078 ntBASIC15.37■□□□□ 0.05
Rtn4Q99P72 Gm7003-201ENSMUST00000195089 312 ntBASIC15.37■□□□□ 0.05
Rtn4Q99P72 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 BC060293-201ENSMUST00000207005 1104 ntBASIC15.37■□□□□ 0.05
Rtn4Q99P72 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.37■□□□□ 0.05
Rtn4Q99P72 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.37■□□□□ 0.05
Rtn4Q99P72 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rtn4Q99P72 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm43162-201ENSMUST00000198292 1770 ntBASIC15.36■□□□□ 0.05
Rtn4Q99P72 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.36■□□□□ 0.05
Rtn4Q99P72 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Ccl20-203ENSMUST00000186832 772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm37987-201ENSMUST00000194999 825 ntBASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm44395-201ENSMUST00000197056 153 ntBASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm43895-201ENSMUST00000203219 855 ntBASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm4928-201ENSMUST00000219622 850 ntBASIC15.36■□□□□ 0.05
Rtn4Q99P72 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Mrps31-201ENSMUST00000033934 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.36■□□□□ 0.05
Rtn4Q99P72 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rtn4Q99P72 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rtn4Q99P72 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms