Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf111Q99ML9 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.03□□□□□ -0.64
Rnf111Q99ML9 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm12997-201ENSMUST00000120207 640 ntBASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm27341-201ENSMUST00000183570 106 ntBASIC11.03□□□□□ -0.64
Rnf111Q99ML9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf111Q99ML9 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf111Q99ML9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm24990-201ENSMUST00000157406 323 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm28937-201ENSMUST00000185413 695 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm29400-201ENSMUST00000187208 695 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm28450-201ENSMUST00000187349 638 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm28662-201ENSMUST00000188446 695 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm28251-201ENSMUST00000188835 695 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm37318-201ENSMUST00000194325 695 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm38017-201ENSMUST00000194768 695 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm37287-201ENSMUST00000195449 695 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm37793-201ENSMUST00000195548 695 ntBASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.02□□□□□ -0.65
Rnf111Q99ML9 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms