Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm16459-201ENSMUST00000121443 686 ntBASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm13981-201ENSMUST00000122360 447 ntBASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm5599-201ENSMUST00000209602 788 ntBASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm18035-201ENSMUST00000211962 589 ntBASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 AC138716.2-201ENSMUST00000226670 1016 ntBASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx6-1Q99MA9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm24954-201ENSMUST00000178831 110 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm7985-201ENSMUST00000183329 981 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Mir7035-201ENSMUST00000184713 82 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm6606-201ENSMUST00000193613 947 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm37197-201ENSMUST00000195607 401 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm44323-201ENSMUST00000198689 129 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm45094-201ENSMUST00000207013 617 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Gm2448-201ENSMUST00000207080 559 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nkx6-1Q99MA9 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms