Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Thumpd1Q99J36 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm15370-201ENSMUST00000117158 253 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm15207-201ENSMUST00000119259 442 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm11783-201ENSMUST00000119549 885 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Mir1896-201ENSMUST00000122641 81 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm24074-201ENSMUST00000158178 260 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm43184-201ENSMUST00000197247 542 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm4978-201ENSMUST00000071565 801 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Thumpd1Q99J36 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.09□□□□□ -0.79
Thumpd1Q99J36 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms