Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm24791-201ENSMUST00000104284 131 ntBASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm12943-201ENSMUST00000119616 210 ntBASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm14247-201ENSMUST00000120950 237 ntBASIC13.18□□□□□ -0.3
Smc1bQ920F6 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.18□□□□□ -0.3
Smc1bQ920F6 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.18□□□□□ -0.3
Smc1bQ920F6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Gm11979-201ENSMUST00000119629 743 ntBASIC13.17□□□□□ -0.3
Smc1bQ920F6 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.17□□□□□ -0.3
Smc1bQ920F6 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Gm22146-201ENSMUST00000157397 288 ntBASIC13.17□□□□□ -0.3
Smc1bQ920F6 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.17□□□□□ -0.3
Smc1bQ920F6 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.17□□□□□ -0.3
Smc1bQ920F6 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.17□□□□□ -0.3
Smc1bQ920F6 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smc1bQ920F6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gm14807-201ENSMUST00000116640 983 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gm26989-201ENSMUST00000182608 749 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gm6108-201ENSMUST00000208365 367 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gm8342-201ENSMUST00000209839 757 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.16□□□□□ -0.3
Smc1bQ920F6 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Gm5451-201ENSMUST00000080545 579 ntBASIC13.16□□□□□ -0.3
Smc1bQ920F6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms