Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Gm37981-201ENSMUST00000194280 535 ntBASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Gm43186-201ENSMUST00000198130 824 ntBASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Mir7686-201ENSMUST00000200604 57 ntBASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Gm11836-201ENSMUST00000121022 441 ntBASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Gm23699-201ENSMUST00000158835 135 ntBASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Spcs1-203ENSMUST00000226374 592 ntBASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhb1Q91Y08 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb1Q91Y08 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Gm12419-201ENSMUST00000116649 636 ntBASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Gm8111-201ENSMUST00000117659 987 ntBASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Gm9062-201ENSMUST00000117712 727 ntBASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Mir5120-201ENSMUST00000175020 78 ntBASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Gm43058-201ENSMUST00000197645 625 ntBASIC11.77□□□□□ -0.53
Pcdhb1Q91Y08 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms