Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm11434-201ENSMUST00000122379 629 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm10051-201ENSMUST00000145209 414 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm10807-201ENSMUST00000177134 795 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm44506-201ENSMUST00000206278 965 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdhga4Q91XY4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Gm22920-201ENSMUST00000102175 109 ntBASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Gm8731-201ENSMUST00000118088 412 ntBASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Gm15352-201ENSMUST00000118696 270 ntBASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Gm9555-201ENSMUST00000200908 583 ntBASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdhga4Q91XY4 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms