Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm28937-201ENSMUST00000185413 695 ntBASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Gm29400-201ENSMUST00000187208 695 ntBASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Gm28662-201ENSMUST00000188446 695 ntBASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Gm28251-201ENSMUST00000188835 695 ntBASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Gm37318-201ENSMUST00000194325 695 ntBASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Gm38017-201ENSMUST00000194768 695 ntBASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Gm37287-201ENSMUST00000195449 695 ntBASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Gm37793-201ENSMUST00000195548 695 ntBASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Gm6266-201ENSMUST00000203844 806 ntBASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ebf4Q8K4J2 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm11989-201ENSMUST00000117240 672 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm11362-201ENSMUST00000118838 850 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm17150-201ENSMUST00000165577 381 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ebf4Q8K4J2 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ebf4Q8K4J2 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms