Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clip4Q8CI96 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clip4Q8CI96 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Clip4Q8CI96 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clip4Q8CI96 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.46□□□□□ -0.58
Clip4Q8CI96 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clip4Q8CI96 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clip4Q8CI96 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clip4Q8CI96 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clip4Q8CI96 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Clip4Q8CI96 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.46□□□□□ -0.58
Clip4Q8CI96 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clip4Q8CI96 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.46□□□□□ -0.58
Clip4Q8CI96 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.45□□□□□ -0.58
Clip4Q8CI96 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.45□□□□□ -0.58
Clip4Q8CI96 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Gm14441-201ENSMUST00000121960 540 ntBASIC11.45□□□□□ -0.58
Clip4Q8CI96 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Gm38117-201ENSMUST00000194653 939 ntBASIC11.45□□□□□ -0.58
Clip4Q8CI96 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.45□□□□□ -0.58
Clip4Q8CI96 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.45□□□□□ -0.58
Clip4Q8CI96 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clip4Q8CI96 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.44□□□□□ -0.58
Clip4Q8CI96 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Clip4Q8CI96 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.44□□□□□ -0.58
Clip4Q8CI96 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.44□□□□□ -0.58
Clip4Q8CI96 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Clip4Q8CI96 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.44□□□□□ -0.58
Clip4Q8CI96 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gm13809-201ENSMUST00000117921 597 ntBASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gm8815-201ENSMUST00000173809 620 ntBASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gm10254-201ENSMUST00000052888 867 ntBASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.44□□□□□ -0.58
Clip4Q8CI96 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clip4Q8CI96 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Clip4Q8CI96 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms