Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdlim5Q8CI51 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Pdlim5Q8CI51 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gm14208-201ENSMUST00000119645 678 ntBASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gm13461-201ENSMUST00000120980 662 ntBASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Pdlim5Q8CI51 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Gm12579-201ENSMUST00000118040 783 ntBASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Gm8199-201ENSMUST00000121323 823 ntBASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 AU022133-201ENSMUST00000200601 873 ntBASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pdlim5Q8CI51 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms