Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm13392-201ENSMUST00000117708 150 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm11573-201ENSMUST00000119956 394 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm10807-201ENSMUST00000177134 795 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Mir7677-201ENSMUST00000184226 67 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm29615-201ENSMUST00000185371 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm28224-201ENSMUST00000186078 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm29001-201ENSMUST00000186177 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm28292-201ENSMUST00000186593 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm28101-201ENSMUST00000187608 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm29076-201ENSMUST00000187689 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm28302-201ENSMUST00000187931 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm28646-201ENSMUST00000188220 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm28205-201ENSMUST00000189177 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm29032-201ENSMUST00000189797 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm28695-201ENSMUST00000190300 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm37448-201ENSMUST00000192795 697 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm9353-201ENSMUST00000200472 604 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm13097-201ENSMUST00000210722 397 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Gm7399-201ENSMUST00000032395 858 ntBASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc28aQ8CEI3 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm25700-201ENSMUST00000177693 110 ntBASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm27516-201ENSMUST00000184237 98 ntBASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm45865-201ENSMUST00000211815 945 ntBASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Cts7-204ENSMUST00000225321 1257 ntBASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc28aQ8CEI3 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms