Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm7857-201ENSMUST00000117957 358 ntBASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Gm4909-201ENSMUST00000118749 794 ntBASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Gm16505-201ENSMUST00000179981 232 ntBASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrif1Q8CDD9 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Gm27341-201ENSMUST00000183570 106 ntBASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Gm43966-201ENSMUST00000203301 612 ntBASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Gm45433-201ENSMUST00000209386 247 ntBASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Gm8913-201ENSMUST00000209491 641 ntBASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrif1Q8CDD9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Mir3102-201ENSMUST00000175555 104 ntBASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Mir7070-201ENSMUST00000183657 86 ntBASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gm18753-201ENSMUST00000201000 566 ntBASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gm17812-201ENSMUST00000204935 318 ntBASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gm44262-201ENSMUST00000204969 372 ntBASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gm18730-201ENSMUST00000218038 343 ntBASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrif1Q8CDD9 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms