Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.25□□□□□ -0.29
Vps53Q8CCB4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm14193-201ENSMUST00000105067 153 ntBASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm8815-201ENSMUST00000173809 620 ntBASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm44980-201ENSMUST00000205826 314 ntBASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Lect2-202ENSMUST00000225183 823 ntBASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps53Q8CCB4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Gm11949-201ENSMUST00000117640 372 ntBASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Gm13182-201ENSMUST00000122241 312 ntBASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Gm43186-201ENSMUST00000198130 824 ntBASIC13.23□□□□□ -0.29
Vps53Q8CCB4 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Gm6450-201ENSMUST00000200896 574 ntBASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.23□□□□□ -0.29
Vps53Q8CCB4 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps53Q8CCB4 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms