Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm22133-201ENSMUST00000102082 109 ntBASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Gm2991-201ENSMUST00000173338 480 ntBASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Gm45113-201ENSMUST00000207518 165 ntBASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Gm4157-201ENSMUST00000211647 679 ntBASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lysmd4Q8CC84 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm13392-201ENSMUST00000117708 150 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm11783-201ENSMUST00000119549 885 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm10807-201ENSMUST00000177134 795 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm27501-201ENSMUST00000183599 107 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm6621-201ENSMUST00000193251 772 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm7399-201ENSMUST00000032395 858 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm4978-201ENSMUST00000071565 801 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Lysmd4Q8CC84 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Lysmd4Q8CC84 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.15□□□□□ -0.79
Lysmd4Q8CC84 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Lysmd4Q8CC84 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.79
Lysmd4Q8CC84 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Lysmd4Q8CC84 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Lysmd4Q8CC84 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Lysmd4Q8CC84 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Lysmd4Q8CC84 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms