Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Alx1Q8C8B0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Alx1Q8C8B0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Alx1Q8C8B0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Alx1Q8C8B0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Alx1Q8C8B0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.21□□□□□ -0.3
Alx1Q8C8B0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Alx1Q8C8B0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Alx1Q8C8B0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.21□□□□□ -0.3
Alx1Q8C8B0 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Alx1Q8C8B0 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Alx1Q8C8B0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Alx1Q8C8B0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm15197-201ENSMUST00000120526 478 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm13182-201ENSMUST00000122241 312 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm15744-201ENSMUST00000161734 213 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm9358-201ENSMUST00000183067 927 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm19009-201ENSMUST00000223072 823 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Gm21939-201ENSMUST00000221137 2773 ntBASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Alx1Q8C8B0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm12274-201ENSMUST00000120062 385 ntBASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm14665-201ENSMUST00000122294 557 ntBASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Alx1Q8C8B0 Mir6407-201ENSMUST00000184510 101 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms