Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm27627-201ENSMUST00000183644 150 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm29615-201ENSMUST00000185371 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm28224-201ENSMUST00000186078 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm29001-201ENSMUST00000186177 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm28292-201ENSMUST00000186593 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm28101-201ENSMUST00000187608 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm29076-201ENSMUST00000187689 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm28302-201ENSMUST00000187931 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm28646-201ENSMUST00000188220 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm28205-201ENSMUST00000189177 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm29032-201ENSMUST00000189797 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm28695-201ENSMUST00000190300 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm37448-201ENSMUST00000192795 697 ntBASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rft1Q8C3B8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.17□□□□□ -0.78
Rft1Q8C3B8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Spata33-207ENSMUST00000212760 4074 ntBASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms