Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Gm3329-201ENSMUST00000159873 556 ntBASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Olfml3-204ENSMUST00000169286 874 ntBASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Gm7525-201ENSMUST00000219425 454 ntBASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smarcal1Q8BJL0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Gm12663-201ENSMUST00000118481 958 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Gm17070-201ENSMUST00000170463 784 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Gm19246-201ENSMUST00000173599 255 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Gm42867-201ENSMUST00000202995 469 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Gm43966-201ENSMUST00000203301 612 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Id2-203ENSMUST00000222667 958 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.13□□□□□ -0.47
Smarcal1Q8BJL0 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms