Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf139Q7TMV1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf139Q7TMV1 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.13□□□□□ -0.47
Rnf139Q7TMV1 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rnf139Q7TMV1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf139Q7TMV1 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf139Q7TMV1 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gm14942-201ENSMUST00000119642 336 ntBASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gm43058-201ENSMUST00000197645 625 ntBASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gm6439-201ENSMUST00000199849 862 ntBASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gm45770-201ENSMUST00000212105 616 ntBASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf139Q7TMV1 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Gm23771-201ENSMUST00000178702 110 ntBASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.11□□□□□ -0.47
Rnf139Q7TMV1 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms