Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc88cQ6VGS5 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc88cQ6VGS5 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Gm44814-201ENSMUST00000207018 434 ntBASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Capsl-202ENSMUST00000226688 739 ntBASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc88cQ6VGS5 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Mir6998-201ENSMUST00000183343 64 ntBASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc88cQ6VGS5 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc88cQ6VGS5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms