Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.19□□□□□ -0.62
Scaf4Q6PFF0 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Gm2991-201ENSMUST00000173338 480 ntBASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Gm44651-201ENSMUST00000207343 372 ntBASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scaf4Q6PFF0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm12241-201ENSMUST00000118330 726 ntBASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm11573-201ENSMUST00000119956 394 ntBASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm5616-201ENSMUST00000165252 384 ntBASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm8741-201ENSMUST00000174736 384 ntBASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm27501-201ENSMUST00000183599 107 ntBASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm27572-201ENSMUST00000183702 255 ntBASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm37597-201ENSMUST00000191853 382 ntBASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm45224-201ENSMUST00000208203 414 ntBASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scaf4Q6PFF0 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms