Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smarcd3Q6P9Z1 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Gm12463-201ENSMUST00000118271 849 ntBASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Gm11783-201ENSMUST00000119549 885 ntBASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Gm26361-201ENSMUST00000158868 186 ntBASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Gm28686-201ENSMUST00000187404 609 ntBASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smarcd3Q6P9Z1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Smarcd3Q6P9Z1 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms