Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca2Q6DIC0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarca2Q6DIC0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Gm11235-201ENSMUST00000117763 333 ntBASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Gm8876-201ENSMUST00000120768 1122 ntBASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Gm14829-201ENSMUST00000121499 1138 ntBASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Gm18122-201ENSMUST00000211390 904 ntBASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Gm8796-201ENSMUST00000219122 936 ntBASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Gm38312-201ENSMUST00000195426 1746 ntBASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Gm8725-201ENSMUST00000221829 1333 ntBASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarca2Q6DIC0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Mir7088-201ENSMUST00000184227 86 ntBASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Gm44236-201ENSMUST00000204492 513 ntBASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Gm18124-201ENSMUST00000210695 706 ntBASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smarca2Q6DIC0 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Gm37009-201ENSMUST00000193297 361 ntBASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Gm42617-201ENSMUST00000197640 1229 ntBASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Gm42859-201ENSMUST00000199572 193 ntBASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Gm9515-201ENSMUST00000200276 647 ntBASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Gm5302-201ENSMUST00000202130 796 ntBASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Gm6859-201ENSMUST00000218614 989 ntBASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smarca2Q6DIC0 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Gm44304-201ENSMUST00000200509 145 ntBASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Gm44388-201ENSMUST00000204350 258 ntBASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 AC154433.1-201ENSMUST00000224401 1183 ntBASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 AC161172.1-201ENSMUST00000227801 486 ntBASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarca2Q6DIC0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms