Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85aQ5SP85 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm12389-201ENSMUST00000117696 418 ntBASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm11960-201ENSMUST00000122068 925 ntBASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm9372-201ENSMUST00000168454 430 ntBASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm4903-201ENSMUST00000210462 405 ntBASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85aQ5SP85 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Gm15528-201ENSMUST00000117821 864 ntBASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Gm24328-201ENSMUST00000175104 67 ntBASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Gm21778-201ENSMUST00000178779 471 ntBASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Gm37197-201ENSMUST00000195607 401 ntBASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ccdc85aQ5SP85 Gm43506-201ENSMUST00000200675 753 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms