Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Gm13071-201ENSMUST00000122237 376 ntBASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Gm17107-201ENSMUST00000170983 553 ntBASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 AC134607.1-201ENSMUST00000214707 485 ntBASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13aQ5H8C4 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm21963-201ENSMUST00000179519 330 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm14571-201ENSMUST00000118292 570 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm13002-201ENSMUST00000119286 682 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm5766-202ENSMUST00000161633 799 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm6276-201ENSMUST00000120159 579 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm23479-201ENSMUST00000158876 122 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm6686-201ENSMUST00000178455 258 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm20474-201ENSMUST00000180089 596 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm9578-201ENSMUST00000182354 753 ntBASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13aQ5H8C4 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm43362-201ENSMUST00000198192 2470 ntBASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm5259-201ENSMUST00000191231 800 ntBASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 AL844586.1-201ENSMUST00000224297 1042 ntBASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 AC114585.2-201ENSMUST00000227693 486 ntBASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms