Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rc3h1Q4VGL6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Gm22442-201ENSMUST00000157256 144 ntBASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Gm43058-201ENSMUST00000197645 625 ntBASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rc3h1Q4VGL6 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gm45657-201ENSMUST00000211318 1349 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gm12791-201ENSMUST00000120788 655 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gm3726-201ENSMUST00000203110 785 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gm19091-201ENSMUST00000208120 978 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gm25517-201ENSMUST00000083865 134 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rc3h1Q4VGL6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms