Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.11□□□□□ -0.15
Usp48Q3V0C5 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Gm25998-201ENSMUST00000175397 53 ntBASIC14.11□□□□□ -0.15
Usp48Q3V0C5 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Gm37852-201ENSMUST00000193027 350 ntBASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Usp48Q3V0C5 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm25053-201ENSMUST00000103982 133 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm25922-201ENSMUST00000104281 130 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm24679-201ENSMUST00000158762 111 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm16167-201ENSMUST00000160428 1065 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm28833-201ENSMUST00000189671 559 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm25053-202ENSMUST00000199731 132 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm43380-201ENSMUST00000200421 220 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm30671-201ENSMUST00000214898 318 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 AC132446.1-201ENSMUST00000222655 226 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp48Q3V0C5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp48Q3V0C5 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms