Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm20121-201ENSMUST00000198547 1594 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm14921-201ENSMUST00000118643 908 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm15711-201ENSMUST00000118889 535 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm12380-201ENSMUST00000119012 544 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm14832-201ENSMUST00000121289 322 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm5778-201ENSMUST00000171003 1072 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm17711-201ENSMUST00000172028 237 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm26238-201ENSMUST00000175538 117 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm9540-201ENSMUST00000188230 478 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm34701-201ENSMUST00000204213 849 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Znf48Q3US17 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 AC159297.2-201ENSMUST00000219567 1075 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 CT025551.1-201ENSMUST00000223996 692 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Gm26831-201ENSMUST00000181458 1380 ntBASIC9.73□□□□□ -0.85
Znf48Q3US17 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.73□□□□□ -0.85
Znf48Q3US17 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Znf48Q3US17 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Znf48Q3US17 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm12165-201ENSMUST00000117047 342 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm12015-201ENSMUST00000117065 843 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm9164-201ENSMUST00000118700 1014 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm13438-201ENSMUST00000120100 573 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.72□□□□□ -0.85
Znf48Q3US17 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Mir3473a-201ENSMUST00000175011 78 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC9.72□□□□□ -0.85
Znf48Q3US17 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm7600-201ENSMUST00000209657 785 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm18329-201ENSMUST00000215832 589 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms