Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm32999-201ENSMUST00000192693 562 ntBASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Rprl1-202ENSMUST00000198476 238 ntBASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.05□□□□□ -0.48
Trim43aQ3TL54 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.04□□□□□ -0.48
Trim43aQ3TL54 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Gm20495-201ENSMUST00000173902 235 ntBASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim43aQ3TL54 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms