Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cul4aQ3TCH7 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cul4aQ3TCH7 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cul4aQ3TCH7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cul4aQ3TCH7 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cul4aQ3TCH7 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cul4aQ3TCH7 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.91□□□□□ -0.5
Cul4aQ3TCH7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cul4aQ3TCH7 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cul4aQ3TCH7 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Gm13350-201ENSMUST00000120519 479 ntBASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cul4aQ3TCH7 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cul4aQ3TCH7 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.9□□□□□ -0.51
Cul4aQ3TCH7 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cul4aQ3TCH7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cul4aQ3TCH7 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cul4aQ3TCH7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cul4aQ3TCH7 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cul4aQ3TCH7 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Snord17-201ENSMUST00000104526 238 ntBASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Gm12247-201ENSMUST00000117585 670 ntBASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Gm8199-201ENSMUST00000121323 823 ntBASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Gm3150-201ENSMUST00000166418 204 ntBASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Gm5302-201ENSMUST00000202130 796 ntBASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Gm10288-201ENSMUST00000084614 537 ntBASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cul4aQ3TCH7 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 148.8 ms