Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Gm13120-201ENSMUST00000117343 1446 ntBASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Gm13104-201ENSMUST00000119651 1446 ntBASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Snora68-201ENSMUST00000104375 131 ntBASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Gm11544-201ENSMUST00000120215 382 ntBASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Gm16480-201ENSMUST00000120439 832 ntBASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Gm22662-201ENSMUST00000175290 256 ntBASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trpm1Q2TV84 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trpm1Q2TV84 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Gm13688-201ENSMUST00000121557 608 ntBASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Mipep-ps-201ENSMUST00000177439 291 ntBASIC15.76■□□□□ 0.11
Trpm1Q2TV84 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 AC127583.1-201ENSMUST00000224351 540 ntBASIC15.76■□□□□ 0.11
Trpm1Q2TV84 AC123061.1-201ENSMUST00000228021 999 ntBASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Gm42833-201ENSMUST00000196019 2124 ntBASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 AC167022.1-201ENSMUST00000218647 1458 ntBASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trpm1Q2TV84 AC163646.3-202ENSMUST00000228685 691 ntBASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Gm23458-201ENSMUST00000083257 169 ntBASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Gm10617-201ENSMUST00000098368 1172 ntBASIC15.76■□□□□ 0.11
Trpm1Q2TV84 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Gm25154-201ENSMUST00000157123 119 ntBASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Gm6859-201ENSMUST00000218614 989 ntBASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC15.75■□□□□ 0.11
Trpm1Q2TV84 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms