Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm26313-201ENSMUST00000157770 308 ntBASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm6612-201ENSMUST00000170777 395 ntBASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna5Q2MKA5 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm12418-201ENSMUST00000118116 942 ntBASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm12986-201ENSMUST00000119037 967 ntBASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm12745-201ENSMUST00000121767 214 ntBASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm16165-201ENSMUST00000160140 795 ntBASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Gm9353-201ENSMUST00000200472 604 ntBASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna5Q2MKA5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna5Q2MKA5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna5Q2MKA5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.46□□□□□ -0.26
Chrna5Q2MKA5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna5Q2MKA5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna5Q2MKA5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna5Q2MKA5 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna5Q2MKA5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna5Q2MKA5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna5Q2MKA5 Snord17-201ENSMUST00000104526 238 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms