Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.55□□□□□ -0.56
Ebf1Q07802 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.55□□□□□ -0.56
Ebf1Q07802 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm7504-201ENSMUST00000201449 424 ntBASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm18460-201ENSMUST00000208088 464 ntBASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm18514-201ENSMUST00000218980 436 ntBASIC11.55□□□□□ -0.56
Ebf1Q07802 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm4604-201ENSMUST00000025040 390 ntBASIC11.55□□□□□ -0.56
Ebf1Q07802 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ebf1Q07802 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ebf1Q07802 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Ebf1Q07802 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.54□□□□□ -0.56
Ebf1Q07802 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm14270-201ENSMUST00000118388 846 ntBASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm22146-201ENSMUST00000157397 288 ntBASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm8451-201ENSMUST00000170338 447 ntBASIC11.54□□□□□ -0.56
Ebf1Q07802 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms