Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.44□□□□□ -0.58
Pfdn6Q03958 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.43□□□□□ -0.58
Pfdn6Q03958 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Mir6420-201ENSMUST00000185032 102 ntBASIC11.43□□□□□ -0.58
Pfdn6Q03958 Gm28450-201ENSMUST00000187349 638 ntBASIC11.43□□□□□ -0.58
Pfdn6Q03958 Gm19208-201ENSMUST00000213861 912 ntBASIC11.43□□□□□ -0.58
Pfdn6Q03958 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.43□□□□□ -0.58
Pfdn6Q03958 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.43□□□□□ -0.58
Pfdn6Q03958 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Ntng1-201ENSMUST00000051253 327 ntBASIC11.43□□□□□ -0.58
Pfdn6Q03958 Gm10254-201ENSMUST00000052888 867 ntBASIC11.43□□□□□ -0.58
Pfdn6Q03958 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.43□□□□□ -0.58
Pfdn6Q03958 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.43□□□□□ -0.58
Pfdn6Q03958 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn6Q03958 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Gm14028-201ENSMUST00000117434 479 ntBASIC11.42□□□□□ -0.58
Pfdn6Q03958 Gm13035-201ENSMUST00000117496 342 ntBASIC11.42□□□□□ -0.58
Pfdn6Q03958 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.42□□□□□ -0.58
Pfdn6Q03958 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 AU022133-201ENSMUST00000200601 873 ntBASIC11.42□□□□□ -0.58
Pfdn6Q03958 Gm9257-201ENSMUST00000221254 232 ntBASIC11.42□□□□□ -0.58
Pfdn6Q03958 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms