Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.79□□□□□ -0.68
Nkx3-2P97503 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.79□□□□□ -0.68
Nkx3-2P97503 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm22442-201ENSMUST00000157256 144 ntBASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.79□□□□□ -0.68
Nkx3-2P97503 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm37981-201ENSMUST00000194280 535 ntBASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm43520-201ENSMUST00000197996 164 ntBASIC10.79□□□□□ -0.68
Nkx3-2P97503 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm7600-201ENSMUST00000209657 785 ntBASIC10.79□□□□□ -0.68
Nkx3-2P97503 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm4978-201ENSMUST00000071565 801 ntBASIC10.79□□□□□ -0.68
Nkx3-2P97503 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.79□□□□□ -0.68
Nkx3-2P97503 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx3-2P97503 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm23272-201ENSMUST00000104053 129 ntBASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm11244-201ENSMUST00000121243 237 ntBASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm9089-201ENSMUST00000122027 526 ntBASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm6485-201ENSMUST00000160676 439 ntBASIC10.78□□□□□ -0.68
Nkx3-2P97503 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.78□□□□□ -0.68
Nkx3-2P97503 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm38314-201ENSMUST00000195709 625 ntBASIC10.78□□□□□ -0.68
Nkx3-2P97503 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms