Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Lig3P97386 Gm10731-201ENSMUST00000181171 448 ntBASIC12.5□□□□□ -0.41
Lig3P97386 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Gm44958-201ENSMUST00000203734 736 ntBASIC12.5□□□□□ -0.41
Lig3P97386 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lig3P97386 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.5□□□□□ -0.41
Lig3P97386 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.5□□□□□ -0.41
Lig3P97386 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lig3P97386 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.5□□□□□ -0.41
Lig3P97386 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lig3P97386 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Lig3P97386 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.49□□□□□ -0.41
Lig3P97386 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lig3P97386 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lig3P97386 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lig3P97386 Gm13263-201ENSMUST00000121271 838 ntBASIC12.49□□□□□ -0.41
Lig3P97386 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Gm4862-201ENSMUST00000170405 438 ntBASIC12.49□□□□□ -0.41
Lig3P97386 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.49□□□□□ -0.41
Lig3P97386 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.49□□□□□ -0.41
Lig3P97386 Gm35713-201ENSMUST00000210516 199 ntBASIC12.49□□□□□ -0.41
Lig3P97386 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.49□□□□□ -0.41
Lig3P97386 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.49□□□□□ -0.41
Lig3P97386 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.49□□□□□ -0.41
Lig3P97386 Gm6722-201ENSMUST00000221586 390 ntBASIC12.49□□□□□ -0.41
Lig3P97386 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.49□□□□□ -0.41
Lig3P97386 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lig3P97386 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Lig3P97386 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lig3P97386 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lig3P97386 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lig3P97386 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.48□□□□□ -0.41
Lig3P97386 Gm26286-201ENSMUST00000104166 134 ntBASIC12.48□□□□□ -0.41
Lig3P97386 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.48□□□□□ -0.41
Lig3P97386 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.48□□□□□ -0.41
Lig3P97386 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Lig3P97386 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.48□□□□□ -0.41
Lig3P97386 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.48□□□□□ -0.41
Lig3P97386 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lig3P97386 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.48□□□□□ -0.41
Lig3P97386 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Lig3P97386 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lig3P97386 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lig3P97386 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms