Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.52□□□□□ -0.89
SgcaP82350 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.52□□□□□ -0.89
SgcaP82350 Gm24548-201ENSMUST00000158650 108 ntBASIC9.52□□□□□ -0.89
SgcaP82350 Gm16379-201ENSMUST00000161469 348 ntBASIC9.52□□□□□ -0.89
SgcaP82350 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.52□□□□□ -0.89
SgcaP82350 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Gm9192-201ENSMUST00000183221 985 ntBASIC9.52□□□□□ -0.89
SgcaP82350 Gm8762-201ENSMUST00000193486 339 ntBASIC9.52□□□□□ -0.89
SgcaP82350 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Gm40466-201ENSMUST00000212174 422 ntBASIC9.52□□□□□ -0.89
SgcaP82350 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
SgcaP82350 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
SgcaP82350 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SgcaP82350 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.52□□□□□ -0.89
SgcaP82350 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
SgcaP82350 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SgcaP82350 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
SgcaP82350 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
SgcaP82350 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.51□□□□□ -0.89
SgcaP82350 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.51□□□□□ -0.89
SgcaP82350 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.51□□□□□ -0.89
SgcaP82350 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SgcaP82350 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
SgcaP82350 Gm4986-201ENSMUST00000119731 549 ntBASIC9.51□□□□□ -0.89
SgcaP82350 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
SgcaP82350 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Gm25043-201ENSMUST00000158604 212 ntBASIC9.51□□□□□ -0.89
SgcaP82350 Ap1g1-206ENSMUST00000179104 1096 ntBASIC9.51□□□□□ -0.89
SgcaP82350 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.51□□□□□ -0.89
SgcaP82350 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SgcaP82350 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.51□□□□□ -0.89
SgcaP82350 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.51□□□□□ -0.89
SgcaP82350 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.51□□□□□ -0.89
SgcaP82350 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.51□□□□□ -0.89
SgcaP82350 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.51□□□□□ -0.89
SgcaP82350 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.51□□□□□ -0.89
SgcaP82350 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.51□□□□□ -0.89
SgcaP82350 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.51□□□□□ -0.89
SgcaP82350 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SgcaP82350 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SgcaP82350 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
SgcaP82350 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
SgcaP82350 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
SgcaP82350 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms