Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PrkcbP68404 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PrkcbP68404 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkcbP68404 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PrkcbP68404 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkcbP68404 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.27□□□□□ -0.44
PrkcbP68404 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkcbP68404 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
PrkcbP68404 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PrkcbP68404 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.27□□□□□ -0.44
PrkcbP68404 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
PrkcbP68404 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.27□□□□□ -0.45
PrkcbP68404 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.27□□□□□ -0.45
PrkcbP68404 Gm15744-201ENSMUST00000161734 213 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.27□□□□□ -0.45
PrkcbP68404 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.27□□□□□ -0.45
PrkcbP68404 Mir6407-201ENSMUST00000184510 101 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Gm8197-202ENSMUST00000193422 934 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Gm42816-201ENSMUST00000198433 325 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Gm43380-201ENSMUST00000200421 220 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.27□□□□□ -0.45
PrkcbP68404 Gm5599-201ENSMUST00000209602 788 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.27□□□□□ -0.45
PrkcbP68404 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PrkcbP68404 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PrkcbP68404 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PrkcbP68404 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.27□□□□□ -0.45
PrkcbP68404 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PrkcbP68404 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
PrkcbP68404 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Gm25072-201ENSMUST00000175233 235 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Gm6407-201ENSMUST00000176468 549 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Gm26134-201ENSMUST00000178484 110 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.26□□□□□ -0.45
PrkcbP68404 Gm43058-201ENSMUST00000197645 625 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Gm42867-201ENSMUST00000202995 469 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.26□□□□□ -0.45
PrkcbP68404 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.26□□□□□ -0.45
PrkcbP68404 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
PrkcbP68404 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PrkcbP68404 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
PrkcbP68404 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
PrkcbP68404 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PrkcbP68404 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.26□□□□□ -0.45
PrkcbP68404 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PrkcbP68404 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
PrkcbP68404 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.25□□□□□ -0.45
PrkcbP68404 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrkcbP68404 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrkcbP68404 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PrkcbP68404 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PrkcbP68404 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms