Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.11□□□□□ -0.79
Sf3b6P59708 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Sf3b6P59708 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.11□□□□□ -0.79
Sf3b6P59708 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Sf3b6P59708 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Sf3b6P59708 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Sf3b6P59708 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sf3b6P59708 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.11□□□□□ -0.79
Sf3b6P59708 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Sf3b6P59708 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Sf3b6P59708 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.1□□□□□ -0.79
Sf3b6P59708 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Sf3b6P59708 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Sf3b6P59708 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.1□□□□□ -0.79
Sf3b6P59708 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.1□□□□□ -0.79
Sf3b6P59708 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sf3b6P59708 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
Sf3b6P59708 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Gm23270-201ENSMUST00000104055 131 ntBASIC10.1□□□□□ -0.79
Sf3b6P59708 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Sf3b6P59708 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Mir1896-201ENSMUST00000122641 81 ntBASIC10.1□□□□□ -0.79
Sf3b6P59708 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.1□□□□□ -0.79
Sf3b6P59708 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sf3b6P59708 Gm27046-201ENSMUST00000182160 463 ntBASIC10.1□□□□□ -0.79
Sf3b6P59708 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.1□□□□□ -0.79
Sf3b6P59708 Gm9723-201ENSMUST00000192100 457 ntBASIC10.1□□□□□ -0.79
Sf3b6P59708 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Sf3b6P59708 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 AC124408.1-201ENSMUST00000228938 707 ntBASIC10.1□□□□□ -0.79
Sf3b6P59708 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Gm10312-201ENSMUST00000078515 489 ntBASIC10.1□□□□□ -0.79
Sf3b6P59708 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.1□□□□□ -0.79
Sf3b6P59708 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sf3b6P59708 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sf3b6P59708 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sf3b6P59708 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.09□□□□□ -0.79
Sf3b6P59708 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm22323-201ENSMUST00000103832 109 ntBASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm26083-201ENSMUST00000157904 193 ntBASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.09□□□□□ -0.79
Sf3b6P59708 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.09□□□□□ -0.79
Sf3b6P59708 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm44008-201ENSMUST00000204345 412 ntBASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm2553-201ENSMUST00000215986 605 ntBASIC10.09□□□□□ -0.79
Sf3b6P59708 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms