Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Nup43P59235 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nup43P59235 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.74□□□□□ -0.69
Nup43P59235 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.74□□□□□ -0.69
Nup43P59235 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nup43P59235 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup43P59235 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.73□□□□□ -0.69
Nup43P59235 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.73□□□□□ -0.69
Nup43P59235 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nup43P59235 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.73□□□□□ -0.69
Nup43P59235 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.73□□□□□ -0.69
Nup43P59235 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nup43P59235 Gm23272-201ENSMUST00000104053 129 ntBASIC10.73□□□□□ -0.69
Nup43P59235 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nup43P59235 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nup43P59235 Gm15617-201ENSMUST00000118973 771 ntBASIC10.73□□□□□ -0.69
Nup43P59235 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.73□□□□□ -0.69
Nup43P59235 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.73□□□□□ -0.69
Nup43P59235 Gm37284-201ENSMUST00000193607 539 ntBASIC10.73□□□□□ -0.69
Nup43P59235 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.73□□□□□ -0.69
Nup43P59235 Gm45574-201ENSMUST00000210921 331 ntBASIC10.73□□□□□ -0.69
Nup43P59235 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.73□□□□□ -0.69
Nup43P59235 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.73□□□□□ -0.69
Nup43P59235 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nup43P59235 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.73□□□□□ -0.69
Nup43P59235 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nup43P59235 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nup43P59235 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.73□□□□□ -0.69
Nup43P59235 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Nup43P59235 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup43P59235 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.72□□□□□ -0.69
Nup43P59235 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.72□□□□□ -0.69
Nup43P59235 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.72□□□□□ -0.69
Nup43P59235 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nup43P59235 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nup43P59235 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nup43P59235 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nup43P59235 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nup43P59235 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nup43P59235 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.72□□□□□ -0.69
Nup43P59235 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.72□□□□□ -0.69
Nup43P59235 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.72□□□□□ -0.69
Nup43P59235 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.72□□□□□ -0.69
Nup43P59235 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nup43P59235 Gm9645-201ENSMUST00000197131 792 ntBASIC10.72□□□□□ -0.69
Nup43P59235 Gm9353-201ENSMUST00000200472 604 ntBASIC10.72□□□□□ -0.69
Nup43P59235 Gm43947-201ENSMUST00000203019 959 ntBASIC10.72□□□□□ -0.69
Nup43P59235 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms