Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm11663-201ENSMUST00000117888 290 ntBASIC12.8□□□□□ -0.36
Rrp1P56183 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.8□□□□□ -0.36
Rrp1P56183 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.8□□□□□ -0.36
Rrp1P56183 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Rrp1P56183 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.8□□□□□ -0.36
Rrp1P56183 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.8□□□□□ -0.36
Rrp1P56183 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.8□□□□□ -0.36
Rrp1P56183 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.8□□□□□ -0.36
Rrp1P56183 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rrp1P56183 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.8□□□□□ -0.36
Rrp1P56183 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Rrp1P56183 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.79□□□□□ -0.36
Rrp1P56183 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Gm23596-201ENSMUST00000104304 132 ntBASIC12.79□□□□□ -0.36
Rrp1P56183 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rrp1P56183 Gm13996-201ENSMUST00000118456 430 ntBASIC12.79□□□□□ -0.36
Rrp1P56183 Gm15617-201ENSMUST00000118973 771 ntBASIC12.79□□□□□ -0.36
Rrp1P56183 Gm8566-201ENSMUST00000120174 465 ntBASIC12.79□□□□□ -0.36
Rrp1P56183 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.79□□□□□ -0.36
Rrp1P56183 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rrp1P56183 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.79□□□□□ -0.36
Rrp1P56183 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Rrp1P56183 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.79□□□□□ -0.36
Rrp1P56183 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.79□□□□□ -0.36
Rrp1P56183 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.79□□□□□ -0.36
Rrp1P56183 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.79□□□□□ -0.36
Rrp1P56183 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rrp1P56183 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.79□□□□□ -0.36
Rrp1P56183 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.79□□□□□ -0.36
Rrp1P56183 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rrp1P56183 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rrp1P56183 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.78□□□□□ -0.36
Rrp1P56183 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rrp1P56183 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.78□□□□□ -0.36
Rrp1P56183 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Rrp1P56183 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rrp1P56183 Gm2383-201ENSMUST00000181461 807 ntBASIC12.78□□□□□ -0.36
Rrp1P56183 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.78□□□□□ -0.36
Rrp1P56183 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.78□□□□□ -0.36
Rrp1P56183 Gm45856-201ENSMUST00000212752 416 ntBASIC12.78□□□□□ -0.36
Rrp1P56183 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rrp1P56183 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Rrp1P56183 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.78□□□□□ -0.36
Rrp1P56183 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms