Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm24954-201ENSMUST00000178831 110 ntBASIC14.34□□□□□ -0.11
Msh6P54276 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Msh6P54276 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Msh6P54276 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Msh6P54276 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Msh6P54276 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Msh6P54276 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Msh6P54276 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.33□□□□□ -0.12
Msh6P54276 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Msh6P54276 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC14.33□□□□□ -0.12
Msh6P54276 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC14.33□□□□□ -0.12
Msh6P54276 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Rubie-203ENSMUST00000227803 2430 ntBASIC14.33□□□□□ -0.12
Msh6P54276 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.33□□□□□ -0.12
Msh6P54276 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Msh6P54276 Mir181d-201ENSMUST00000102383 72 ntBASIC14.33□□□□□ -0.12
Msh6P54276 Gm25343-201ENSMUST00000157460 107 ntBASIC14.33□□□□□ -0.12
Msh6P54276 Gm9372-201ENSMUST00000168454 430 ntBASIC14.33□□□□□ -0.12
Msh6P54276 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC14.33□□□□□ -0.12
Msh6P54276 Gm43506-201ENSMUST00000200675 753 ntBASIC14.33□□□□□ -0.12
Msh6P54276 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC14.33□□□□□ -0.12
Msh6P54276 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC14.33□□□□□ -0.12
Msh6P54276 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Msh6P54276 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 CT030652.1-201ENSMUST00000227377 1235 ntBASIC14.33□□□□□ -0.12
Msh6P54276 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh6P54276 Gm6170-201ENSMUST00000187672 1388 ntBASIC14.32□□□□□ -0.12
Msh6P54276 Gm5308-201ENSMUST00000196752 1354 ntBASIC14.32□□□□□ -0.12
Msh6P54276 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Msh6P54276 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Msh6P54276 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Msh6P54276 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Msh6P54276 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Msh6P54276 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Msh6P54276 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.32□□□□□ -0.12
Msh6P54276 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Gm37452-201ENSMUST00000194416 1160 ntBASIC14.32□□□□□ -0.12
Msh6P54276 Gm31274-201ENSMUST00000197356 229 ntBASIC14.32□□□□□ -0.12
Msh6P54276 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC14.32□□□□□ -0.12
Msh6P54276 Gm2448-201ENSMUST00000207080 559 ntBASIC14.32□□□□□ -0.12
Msh6P54276 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC14.32□□□□□ -0.12
Msh6P54276 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Msh6P54276 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.32□□□□□ -0.12
Msh6P54276 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh6P54276 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Msh6P54276 Erich3-203ENSMUST00000189969 3460 ntBASIC14.31□□□□□ -0.12
Msh6P54276 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms