Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Fdft1P53798 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Fdft1P53798 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Gm14028-201ENSMUST00000117434 479 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 Gm15515-201ENSMUST00000117827 822 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.35□□□□□ -0.59
Fdft1P53798 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.35□□□□□ -0.59
Fdft1P53798 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.35□□□□□ -0.59
Fdft1P53798 Gm24990-201ENSMUST00000157406 323 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 Gm18734-201ENSMUST00000172937 808 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 Gm27552-201ENSMUST00000183351 62 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 Gm27844-201ENSMUST00000183613 62 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 Gm38151-201ENSMUST00000195085 289 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.35□□□□□ -0.59
Fdft1P53798 Gm6867-201ENSMUST00000219165 425 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Fdft1P53798 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Fdft1P53798 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.35□□□□□ -0.59
Fdft1P53798 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Fdft1P53798 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Fdft1P53798 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Fdft1P53798 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Fdft1P53798 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Fdft1P53798 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Fdft1P53798 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Fdft1P53798 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.34□□□□□ -0.59
Fdft1P53798 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.34□□□□□ -0.59
Fdft1P53798 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.34□□□□□ -0.59
Fdft1P53798 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.34□□□□□ -0.59
Fdft1P53798 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Fdft1P53798 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.34□□□□□ -0.59
Fdft1P53798 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.34□□□□□ -0.59
Fdft1P53798 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.34□□□□□ -0.59
Fdft1P53798 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.34□□□□□ -0.59
Fdft1P53798 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Fdft1P53798 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.34□□□□□ -0.59
Fdft1P53798 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.34□□□□□ -0.59
Fdft1P53798 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Fdft1P53798 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.34□□□□□ -0.59
Fdft1P53798 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Fdft1P53798 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.34□□□□□ -0.59
Fdft1P53798 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.34□□□□□ -0.59
Fdft1P53798 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.33□□□□□ -0.59
Fdft1P53798 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Fdft1P53798 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Fdft1P53798 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Fdft1P53798 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Fdft1P53798 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Fdft1P53798 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms