Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.03□□□□□ -0.8
GdnfP48540 Gm14441-201ENSMUST00000121960 540 ntBASIC10.03□□□□□ -0.8
GdnfP48540 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Gm15276-201ENSMUST00000145953 498 ntBASIC10.03□□□□□ -0.8
GdnfP48540 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.03□□□□□ -0.8
GdnfP48540 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.03□□□□□ -0.8
GdnfP48540 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
GdnfP48540 Gm5706-201ENSMUST00000181525 993 ntBASIC10.03□□□□□ -0.8
GdnfP48540 Gm17790-201ENSMUST00000191545 1228 ntBASIC10.03□□□□□ -0.8
GdnfP48540 Gm19187-201ENSMUST00000206781 892 ntBASIC10.03□□□□□ -0.8
GdnfP48540 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
GdnfP48540 Gm45598-202ENSMUST00000210719 986 ntBASIC10.03□□□□□ -0.8
GdnfP48540 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.03□□□□□ -0.8
GdnfP48540 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.03□□□□□ -0.8
GdnfP48540 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.03□□□□□ -0.8
GdnfP48540 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
GdnfP48540 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.03□□□□□ -0.8
GdnfP48540 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.03□□□□□ -0.8
GdnfP48540 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
GdnfP48540 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
GdnfP48540 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.02□□□□□ -0.8
GdnfP48540 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.02□□□□□ -0.8
GdnfP48540 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
GdnfP48540 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
GdnfP48540 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
GdnfP48540 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.02□□□□□ -0.81
GdnfP48540 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.02□□□□□ -0.81
GdnfP48540 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
GdnfP48540 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
GdnfP48540 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.02□□□□□ -0.81
GdnfP48540 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.02□□□□□ -0.81
GdnfP48540 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.02□□□□□ -0.81
GdnfP48540 Gm29107-201ENSMUST00000190910 347 ntBASIC10.02□□□□□ -0.81
GdnfP48540 Rprl1-202ENSMUST00000198476 238 ntBASIC10.02□□□□□ -0.81
GdnfP48540 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC10.02□□□□□ -0.81
GdnfP48540 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
GdnfP48540 Gm13097-201ENSMUST00000210722 397 ntBASIC10.02□□□□□ -0.81
GdnfP48540 Lect2-202ENSMUST00000225183 823 ntBASIC10.02□□□□□ -0.81
GdnfP48540 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.02□□□□□ -0.81
GdnfP48540 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.02□□□□□ -0.81
GdnfP48540 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.02□□□□□ -0.81
GdnfP48540 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
GdnfP48540 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.02□□□□□ -0.81
GdnfP48540 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
GdnfP48540 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.02□□□□□ -0.81
GdnfP48540 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
GdnfP48540 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
GdnfP48540 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
GdnfP48540 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
GdnfP48540 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.01□□□□□ -0.81
GdnfP48540 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.01□□□□□ -0.81
GdnfP48540 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms