Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.28□□□□□ -0.76
Rfx3P48381 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rfx3P48381 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rfx3P48381 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rfx3P48381 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Rfx3P48381 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.27□□□□□ -0.76
Rfx3P48381 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rfx3P48381 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
Rfx3P48381 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rfx3P48381 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Rfx3P48381 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rfx3P48381 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rfx3P48381 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Rfx3P48381 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.27□□□□□ -0.77
Rfx3P48381 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.27□□□□□ -0.77
Rfx3P48381 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.27□□□□□ -0.77
Rfx3P48381 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rfx3P48381 Gm12857-201ENSMUST00000117678 592 ntBASIC10.27□□□□□ -0.77
Rfx3P48381 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.27□□□□□ -0.77
Rfx3P48381 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Rfx3P48381 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.27□□□□□ -0.77
Rfx3P48381 Gm3332-201ENSMUST00000189337 928 ntBASIC10.27□□□□□ -0.77
Rfx3P48381 Gm37666-201ENSMUST00000194110 866 ntBASIC10.27□□□□□ -0.77
Rfx3P48381 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Rfx3P48381 Gm5363-201ENSMUST00000211927 938 ntBASIC10.27□□□□□ -0.77
Rfx3P48381 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.27□□□□□ -0.77
Rfx3P48381 Lect2-202ENSMUST00000225183 823 ntBASIC10.27□□□□□ -0.77
Rfx3P48381 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.27□□□□□ -0.77
Rfx3P48381 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Rfx3P48381 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Rfx3P48381 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.27□□□□□ -0.77
Rfx3P48381 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.27□□□□□ -0.77
Rfx3P48381 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Rfx3P48381 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rfx3P48381 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Rfx3P48381 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.26□□□□□ -0.77
Rfx3P48381 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Rfx3P48381 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rfx3P48381 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rfx3P48381 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
Rfx3P48381 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.26□□□□□ -0.77
Rfx3P48381 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Rfx3P48381 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.26□□□□□ -0.77
Rfx3P48381 Gm11663-201ENSMUST00000117888 290 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Rfx3P48381 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 Gm26461-201ENSMUST00000175064 290 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rfx3P48381 Gm2383-201ENSMUST00000181461 807 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.26□□□□□ -0.77
Rfx3P48381 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Mir8093-201ENSMUST00000185043 137 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 Gm5982-201ENSMUST00000196234 512 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.26□□□□□ -0.77
Rfx3P48381 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.26□□□□□ -0.77
Rfx3P48381 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rfx3P48381 Gm18212-201ENSMUST00000211678 889 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.26□□□□□ -0.77
Rfx3P48381 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rfx3P48381 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rfx3P48381 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms