Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm44551-201ENSMUST00000208804 171 ntBASIC11.11□□□□□ -0.63
Gli1P47806 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.11□□□□□ -0.63
Gli1P47806 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.11□□□□□ -0.63
Gli1P47806 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.11□□□□□ -0.63
Gli1P47806 Gm1821-202ENSMUST00000227415 750 ntBASIC11.11□□□□□ -0.63
Gli1P47806 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gli1P47806 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Gli1P47806 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gli1P47806 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gli1P47806 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gli1P47806 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gli1P47806 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gli1P47806 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gli1P47806 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.11□□□□□ -0.63
Gli1P47806 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gli1P47806 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gli1P47806 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Gli1P47806 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Gli1P47806 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gli1P47806 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Gli1P47806 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.1□□□□□ -0.63
Gli1P47806 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.1□□□□□ -0.63
Gli1P47806 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Gli1P47806 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gli1P47806 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Gli1P47806 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.1□□□□□ -0.63
Gli1P47806 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gli1P47806 Gm13045-201ENSMUST00000119019 712 ntBASIC11.1□□□□□ -0.63
Gli1P47806 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.1□□□□□ -0.63
Gli1P47806 Gm12029-201ENSMUST00000120073 832 ntBASIC11.1□□□□□ -0.63
Gli1P47806 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.1□□□□□ -0.63
Gli1P47806 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.1□□□□□ -0.63
Gli1P47806 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gli1P47806 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.1□□□□□ -0.63
Gli1P47806 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.1□□□□□ -0.63
Gli1P47806 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.1□□□□□ -0.63
Gli1P47806 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gli1P47806 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Gli1P47806 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gli1P47806 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.09□□□□□ -0.63
Gli1P47806 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.09□□□□□ -0.63
Gli1P47806 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Gli1P47806 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Gli1P47806 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Gli1P47806 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.09□□□□□ -0.63
Gli1P47806 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.09□□□□□ -0.63
Gli1P47806 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.09□□□□□ -0.63
Gli1P47806 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.09□□□□□ -0.63
Gli1P47806 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.09□□□□□ -0.63
Gli1P47806 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Gli1P47806 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.09□□□□□ -0.63
Gli1P47806 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Gm13035-201ENSMUST00000117496 342 ntBASIC11.09□□□□□ -0.63
Gli1P47806 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.09□□□□□ -0.63
Gli1P47806 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.09□□□□□ -0.63
Gli1P47806 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.09□□□□□ -0.63
Gli1P47806 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms