Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.95□□□□□ -0.66
Tnfsf4P43488 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Gm27530-201ENSMUST00000184096 98 ntBASIC10.95□□□□□ -0.66
Tnfsf4P43488 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.95□□□□□ -0.66
Tnfsf4P43488 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.95□□□□□ -0.66
Tnfsf4P43488 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfsf4P43488 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.94□□□□□ -0.66
Tnfsf4P43488 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.94□□□□□ -0.66
Tnfsf4P43488 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm25668-201ENSMUST00000157700 129 ntBASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm8459-201ENSMUST00000162504 760 ntBASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm17376-201ENSMUST00000166016 84 ntBASIC10.94□□□□□ -0.66
Tnfsf4P43488 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm16505-201ENSMUST00000179981 232 ntBASIC10.94□□□□□ -0.66
Tnfsf4P43488 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm43630-201ENSMUST00000201550 776 ntBASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.94□□□□□ -0.66
Tnfsf4P43488 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfsf4P43488 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm14724-201ENSMUST00000118400 537 ntBASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.93□□□□□ -0.66
Tnfsf4P43488 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.93□□□□□ -0.66
Tnfsf4P43488 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfsf4P43488 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms