Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm44167-201ENSMUST00000204957 1878 ntBASIC11.67□□□□□ -0.54
HttP42859 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
HttP42859 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 AC160138.2-201ENSMUST00000220255 1531 ntBASIC11.67□□□□□ -0.54
HttP42859 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.67□□□□□ -0.54
HttP42859 Gm12424-201ENSMUST00000179673 447 ntBASIC11.67□□□□□ -0.54
HttP42859 Gm43097-201ENSMUST00000196867 151 ntBASIC11.67□□□□□ -0.54
HttP42859 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
HttP42859 Lect2-202ENSMUST00000225183 823 ntBASIC11.67□□□□□ -0.54
HttP42859 AC141884.2-201ENSMUST00000228811 775 ntBASIC11.67□□□□□ -0.54
HttP42859 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
HttP42859 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
HttP42859 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HttP42859 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
HttP42859 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
HttP42859 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC11.66□□□□□ -0.54
HttP42859 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC11.66□□□□□ -0.54
HttP42859 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC11.66□□□□□ -0.54
HttP42859 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC11.66□□□□□ -0.54
HttP42859 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 AC120406.1-201ENSMUST00000220362 482 ntBASIC11.66□□□□□ -0.54
HttP42859 AC163038.2-201ENSMUST00000224851 650 ntBASIC11.66□□□□□ -0.54
HttP42859 AC158519.1-201ENSMUST00000228615 179 ntBASIC11.66□□□□□ -0.54
HttP42859 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Gm14592-201ENSMUST00000117201 560 ntBASIC11.66□□□□□ -0.54
HttP42859 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Gm8488-201ENSMUST00000176112 1280 ntBASIC11.66□□□□□ -0.54
HttP42859 Gm6008-201ENSMUST00000206542 874 ntBASIC11.66□□□□□ -0.54
HttP42859 Gm18122-201ENSMUST00000211390 904 ntBASIC11.66□□□□□ -0.54
HttP42859 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
HttP42859 Cass4-204ENSMUST00000228775 2629 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
HttP42859 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.66□□□□□ -0.54
HttP42859 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.66□□□□□ -0.54
HttP42859 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.66□□□□□ -0.54
HttP42859 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HttP42859 Gm14676-201ENSMUST00000117722 858 ntBASIC11.66□□□□□ -0.54
HttP42859 Gm42803-201ENSMUST00000201051 451 ntBASIC11.66□□□□□ -0.54
HttP42859 Gm18749-201ENSMUST00000222410 692 ntBASIC11.66□□□□□ -0.54
HttP42859 AC158122.1-201ENSMUST00000227398 673 ntBASIC11.66□□□□□ -0.54
HttP42859 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
HttP42859 Gm11427-201ENSMUST00000117952 1696 ntBASIC11.66□□□□□ -0.54
HttP42859 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Gm12011-201ENSMUST00000119734 618 ntBASIC11.65□□□□□ -0.54
HttP42859 Gm13792-201ENSMUST00000121350 423 ntBASIC11.65□□□□□ -0.54
HttP42859 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
HttP42859 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC11.65□□□□□ -0.54
HttP42859 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
HttP42859 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.65□□□□□ -0.54
HttP42859 Gm37036-201ENSMUST00000192836 2506 ntBASIC11.65□□□□□ -0.54
HttP42859 Gm38038-201ENSMUST00000193803 259 ntBASIC11.65□□□□□ -0.54
HttP42859 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC11.65□□□□□ -0.54
HttP42859 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
HttP42859 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
HttP42859 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms